Supplementary Files

This web page contains links to the .mdl files used in our study on dairy cows.

The same model under three nutritional conditions with an ATP optimization objective

The three nutritional conditions are synthesized in the following table (Table 2). ../data/Table2.png

The same models with different linear objectives

Here, each file corresponds to a distinct vertex of the flux cone. These files corresponds to results synthesized in the following table (Table 4). ../data/Table4.png

Control

The .mdl files corresponding to the 8 extremal vertices in the CTRL condition: CTRL_condition_allvertices.zip

Casein

The .mdl files corresponding to the 8 extremal vertices in the CN condition: CN_condition_allvertices.zip

Hanigan-Baldwin

The .mdl files corresponding to the 13 extremal vertices in the HB condition: HB_condition_allvertices.zip

A picture of the Metabolic network.

Figure 2 is rendered by CellDesigner v4.3 by using a sbml description of the metabolic network. The sbml file is available here: MammaryGlandModel.sbml.

Picture of a simplified version of the model

../data/MammarySimplified.png

Picture of the complete model

../data/MammaryGlandModel_picture.png

Slight modifications of the original network

The model can be slightly modified in order to integrate Long Chain Fatty Acids retro control. This gives rise to three new models depending on the quantity of recycled Fatty Acids.

Cover letter for , Exploring metabolism flexibility in complex organisms through quantitative study of precursor sets for system outputs, article.

CoverLetter.pdf